Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold2892
Parameters: 2 7 7 80 10 50 1000
Length:  57529

Tables:   1   

This is table  1  of  1  ( 29 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
235--273
18
2.2
18
90
9
62
7
0
30
61
1.24
206--270
21
3.2
21
85
8
73
10
1
27
60
1.39
600--680
24
3.4
23
74
17
76
28
3
1
66
1.16
597--642
3
15.7
3
78
13
51
28
2
0
69
1.00
882--937
17
3.2
18
78
14
64
32
0
7
60
1.24
1014--1043
12
2.5
12
94
0
51
46
6
0
46
1.29
11949--12496
44
12.5
44
73
5
401
26
17
25
31
1.97
11944--12496
132
4.2
132
93
0
917
26
16
25
30
1.97
12462--13436
134
7.3
134
95
0
1689
26
21
22
28
1.99
13598--13749
40
3.8
40
81
3
196
30
21
20
27
1.98
13597--13755
82
1.9
83
90
1
257
32
20
19
27
1.97
14210--14291
23
3.6
23
77
12
71
8
1
26
63
1.31
14242--14292
23
2.1
23
89
7
75
5
0
25
68
1.12
14249--14292
23
2.0
23
95
4
81
4
0
25
70
1.06
14623--14708
3
29.3
3
73
19
60
29
3
1
66
1.16
14623--14712
18
4.7
18
77
13
83
30
3
1
65
1.16
14914--14972
18
3.2
19
79
13
70
32
0
6
61
1.22
14914--14969
17
3.1
18
80
12
62
32
0
7
60
1.24
17807--17833
13
2.1
13
100
0
54
70
0
0
29
0.88
17783--17825
8
5.4
8
80
0
50
60
0
4
34
1.17
19091--19139
16
3.1
15
82
8
53
30
0
12
57
1.36
23878--23927
22
2.3
22
89
6
75
44
10
24
22
1.83
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
25077--25101
13
1.9
13
100
0
50
84
0
16
0
0.63
33260--33299
20
2.0
21
90
5
64
37
25
2
35
1.69
33284--33358
37
2.0
37
89
0
114
37
22
1
38
1.63
36384--36594
40
5.3
40
89
4
239
23
20
27
28
1.99
44544--44753
40
5.3
40
88
4
230
23
20
27
28
1.99
46489--47079
314
1.9
314
95
0
1074
30
13
20
35
1.91
54814--54998
40
4.7
40
86
6
218
25
26
22
25
2.00

Tables:   1

The End!