Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold3460
Parameters: 2 7 7 80 10 50 1000
Length:  55664

Tables:   1   

This is table  1  of  1  ( 18 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
3204--3426
40
5.7
39
85
8
267
24
22
27
25
2.00
8296--8391
29
3.3
29
85
1
122
29
31
13
26
1.94
12519--12632
29
4.0
29
77
7
110
31
27
12
28
1.93
17046--17156
29
3.9
29
79
10
111
27
28
14
28
1.95
17380--17423
17
2.6
17
89
3
63
13
18
13
54
1.71
20701--20749
24
2.1
23
85
11
64
59
10
2
28
1.41
21603--21713
29
3.9
29
79
10
111
27
28
14
28
1.95
21944--21980
17
2.2
17
95
0
65
13
21
13
51
1.75
26176--26289
29
4.0
29
82
6
126
28
28
15
28
1.96
26170--26275
29
3.7
29
83
1
133
26
28
16
29
1.96
31853--31952
51
2.0
51
84
4
130
23
16
27
34
1.95
34760--34800
22
2.0
20
85
9
55
21
9
0
68
1.18
36660--36700
13
3.1
14
83
13
52
24
24
31
19
1.98
43176--43200
13
1.9
13
100
0
50
16
36
40
8
1.77
49887--49927
19
2.2
18
91
4
64
21
4
7
65
1.37
50062--50244
68
2.7
68
93
4
298
32
14
30
23
1.94
52489--52756
132
2.0
132
99
0
527
40
6
20
31
1.79
54483--54513
16
1.9
16
93
0
53
51
0
12
35
1.40

Tables:   1

The End!