Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold3005
Parameters: 2 7 7 80 10 50 1000
Length:  54052

Tables:   1   

This is table  1  of  1  ( 19 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1876--2082
38
5.5
39
81
14
249
22
24
27
25
2.00
1874--2082
72
2.8
77
83
10
272
22
23
27
25
2.00
1874--2081
37
5.6
39
80
15
176
23
24
26
25
2.00
9745--9966
40
5.6
40
92
1
340
24
24
26
24
2.00
15785--15912
46
2.8
46
93
1
213
29
29
21
19
1.97
15793--15931
46
3.0
45
87
5
131
28
29
20
20
1.98
22272--22445
46
3.8
46
78
14
205
28
29
20
20
1.98
22279--22449
92
1.8
93
94
1
308
28
29
21
21
1.98
24695--24745
20
2.5
21
73
20
54
37
15
11
35
1.84
32873--32917
16
2.9
16
83
12
58
48
15
0
35
1.45
42504--42574
31
2.3
31
95
0
133
32
25
14
28
1.94
42780--42886
25
4.4
24
91
3
135
25
23
23
28
2.00
42793--42886
25
3.8
25
94
1
154
25
23
25
25
2.00
42917--42947
16
1.9
16
93
0
53
35
16
19
29
1.93
44862--45039
27
6.6
27
83
3
205
26
15
28
29
1.96
44863--45018
82
1.9
81
88
3
233
26
15
28
29
1.96
44859--45039
82
2.2
81
83
2
229
27
15
27
29
1.96
50912--51089
27
6.6
27
84
3
205
29
28
15
26
1.96
50933--51088
82
1.9
81
88
3
233
29
28
15
26
1.96

Tables:   1

The End!