Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold3476
Parameters: 2 7 7 80 10 50 1000
Length:  51725

Tables:   1   

This is table  1  of  1  ( 16 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
7105--7281
27
6.6
27
84
2
203
29
28
15
27
1.96
7126--7280
81
1.9
81
88
2
231
29
28
15
27
1.96
9402--9561
46
3.5
46
79
11
191
21
19
28
30
1.98
13555--13598
18
2.3
20
84
7
56
34
6
2
56
1.38
22718--22778
30
2.0
30
87
0
86
39
4
24
31
1.77
23277--23439
67
2.4
68
80
11
174
32
15
28
23
1.95
25320--25354
18
2.0
17
94
5
61
42
0
0
57
0.99
25563--25621
31
1.9
31
86
13
86
61
5
0
33
1.18
25863--25900
20
1.9
20
88
0
58
36
0
5
57
1.21
26228--26261
12
2.9
12
91
4
52
58
0
0
41
0.98
26247--26295
22
2.2
23
79
17
59
65
2
4
28
1.22
33018--33122
42
2.5
42
79
3
122
31
11
23
33
1.90
35203--35295
33
2.8
33
78
12
84
29
20
23
26
1.99
46028--46250
104
2.2
103
93
2
376
31
31
19
17
1.95
46579--46642
30
2.2
29
81
10
76
29
28
6
35
1.82
46586--46642
30
1.9
30
85
3
80
29
24
7
38
1.82

Tables:   1

The End!