Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold1477
Parameters: 2 7 7 80 10 50 1000
Length:  51133

Tables:   1   

This is table  1  of  1  ( 18 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
563--588
13
2.0
13
100
0
52
0
38
61
0
0.96
7714--7896
79
2.3
81
84
7
232
24
22
27
25
2.00
7715--7898
40
4.6
40
83
9
216
23
22
28
25
2.00
7767--7931
79
2.1
79
84
6
210
25
21
27
25
1.99
15140--15227
40
2.2
40
87
4
124
21
20
30
27
1.98
20178--20228
20
2.5
20
96
0
93
11
31
37
19
1.88
23332--23667
40
8.5
40
90
2
502
24
22
26
26
2.00
29103--29203
28
3.6
28
72
5
87
25
27
15
30
1.96
33174--33284
43
2.6
43
75
5
116
32
25
14
27
1.94
33247--33422
50
3.6
49
84
6
207
22
30
18
28
1.97
36913--36960
24
2.0
24
100
0
96
29
16
4
50
1.64
38875--39127
46
5.5
45
76
12
203
26
29
18
25
1.98
38875--39081
90
2.3
90
81
10
233
26
29
18
25
1.98
38912--39129
46
4.7
47
80
8
218
25
31
19
24
1.98
38912--39126
94
2.3
90
85
7
265
25
31
18
24
1.98
43614--43788
46
3.8
46
78
15
200
20
20
29
29
1.97
43611--43780
93
1.8
93
94
2
306
21
20
29
28
1.98
50813--50977
46
3.6
45
77
18
164
22
20
27
29
1.98

Tables:   1

The End!