Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold689
Parameters: 2 7 7 80 10 50 1000
Length:  48750

Tables:   1   

This is table  1  of  1  ( 15 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
7213--7436
40
5.7
40
82
7
242
25
27
21
25
1.99
7213--7436
79
2.8
77
81
6
252
25
27
21
25
1.99
7368--7445
40
1.9
41
82
10
97
26
28
20
24
1.99
15121--15344
40
5.7
40
82
7
242
25
27
21
25
1.99
15121--15344
79
2.8
77
81
6
252
25
27
21
25
1.99
15276--15353
40
1.9
41
82
10
97
26
28
20
24
1.99
20249--20312
31
2.1
31
87
0
92
25
21
14
39
1.91
20521--20604
26
3.4
25
81
6
91
28
21
23
26
1.99
20652--20698
20
2.3
20
100
0
94
34
19
10
36
1.86
23074--23228
72
2.2
71
81
4
177
20
19
31
28
1.97
28336--28391
29
2.0
29
96
3
105
35
26
19
17
1.94
31321--31456
29
4.8
29
90
5
190
29
30
14
25
1.95
35896--36021
29
4.4
29
84
6
143
26
28
17
26
1.98
46581--46659
15
5.4
15
79
8
83
58
13
17
10
1.63
46581--46667
30
3.0
30
79
11
92
57
14
17
10
1.64

Tables:   1

The End!