Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold2927
Parameters: 2 7 7 80 10 50 1000
Length:  46979

Tables:   1   

This is table  1  of  1  ( 13 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
144--219
28
2.6
28
80
14
84
31
28
14
25
1.95
8096--8163
29
2.3
29
85
5
93
27
30
13
27
1.94
7985--8312
174
1.9
174
94
0
584
31
24
14
30
1.95
8265--8341
29
2.6
28
86
10
102
31
28
14
25
1.95
17093--17197
43
2.4
43
91
0
165
30
16
22
30
1.96
20235--20275
18
2.4
17
88
8
57
29
0
12
58
1.34
22603--22694
48
1.9
48
90
0
148
27
25
19
28
1.99
26465--26597
56
2.4
56
89
0
203
34
24
14
26
1.94
33965--34044
34
2.4
33
85
4
115
22
26
27
23
2.00
33965--34064
34
3.0
32
81
7
112
25
23
25
27
2.00
42928--43112
79
2.3
81
82
7
218
25
22
27
24
2.00
42929--43112
40
4.6
40
80
9
198
25
22
27
24
2.00
42984--43145
79
2.1
79
82
6
195
28
20
25
25
1.99

Tables:   1

The End!