Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold399
Parameters: 2 7 7 80 10 50 1000
Length:  45606

Tables:   1   

This is table  1  of  1  ( 15 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
388--574
40
4.7
40
82
11
233
27
26
22
24
2.00
388--574
82
2.4
76
88
8
270
27
26
22
24
2.00
8314--8498
40
4.6
40
93
2
302
27
27
22
23
2.00
10162--10406
48
5.1
48
95
0
427
32
27
5
34
1.81
21150--21257
20
5.4
20
70
3
74
13
25
22
38
1.91
23327--23397
29
2.5
26
72
18
61
25
14
11
49
1.76
26572--26976
47
8.6
47
94
1
657
28
29
8
33
1.86
30997--31423
40
10.8
40
91
2
675
25
28
22
24
1.99
32879--32957
25
3.3
25
66
16
76
31
29
5
34
1.79
32830--33233
47
8.6
47
95
1
675
28
29
8
33
1.86
37237--37659
39
10.8
40
82
12
495
24
28
22
24
1.99
37237--37659
118
3.6
117
82
12
471
24
28
22
24
1.99
39097--39440
91
3.7
95
81
13
399
30
29
9
30
1.88
39055--39453
91
4.3
90
79
16
377
30
29
8
31
1.87
39055--39444
50
8.3
48
81
12
415
30
30
8
31
1.87

Tables:   1

The End!