Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold2044
Parameters: 2 7 7 80 10 50 1000
Length:  42600

Tables:   1   

This is table  1  of  1  ( 11 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1454--1609
85
1.8
85
87
8
237
25
26
22
25
2.00
1437--1607
42
4.0
41
81
13
188
26
26
21
25
2.00
1606--1655
20
2.3
23
74
22
54
44
20
6
30
1.75
4397--4423
14
1.9
14
100
0
54
33
7
29
29
1.85
16104--16167
32
2.0
32
87
3
94
56
17
9
17
1.66
17853--17889
2
18.5
2
100
0
74
51
0
48
0
1.00
21901--21949
24
2.0
24
92
0
80
42
6
18
32
1.75
35088--35271
78
2.3
81
83
8
227
24
22
27
25
2.00
35088--35271
40
4.7
40
83
8
225
24
22
27
25
2.00
35089--35304
79
2.7
77
79
9
188
25
22
27
24
2.00
35140--35304
79
2.1
78
81
7
192
26
21
27
25
1.99

Tables:   1

The End!