Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold1100
Parameters: 2 7 7 80 10 50 1000
Length:  55543

Tables:   1   

This is table  1  of  1  ( 13 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
3469--3500
8
4.1
8
96
4
57
25
21
0
53
1.46
3477--3525
18
2.6
19
87
6
64
22
22
2
53
1.57
16340--16391
24
2.2
24
100
0
104
42
11
13
32
1.80
25169--25252
39
2.2
39
88
0
123
23
36
19
20
1.95
29333--29393
21
2.9
21
75
18
63
8
13
27
50
1.69
34475--34997
229
2.3
228
86
4
714
23
15
13
47
1.81
37365--37448
40
2.1
40
93
4
143
11
11
36
39
1.79
37538--37562
12
2.1
12
100
0
50
40
16
8
36
1.77
39607--39631
12
2.1
12
100
0
50
40
16
8
36
1.77
40451--40484
14
2.4
14
90
0
50
47
2
0
50
1.16
49337--49391
23
2.4
23
90
0
92
41
3
14
40
1.63
50866--50899
17
2.0
17
94
0
59
50
0
2
47
1.16
53489--55522
7
292.3
7
83
13
2440
13
0
41
43
1.49

Tables:   1

The End!