Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold2865
Parameters: 2 7 7 80 10 50 1000
Length:  38997

Tables:   1   

This is table  1  of  1  ( 20 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
5896--6143
40
6.3
39
84
6
304
27
28
20
23
1.99
5896--6143
79
3.2
79
84
3
322
27
28
20
23
1.99
5900--6144
118
2.1
119
90
3
395
27
28
20
23
1.99
13731--14026
50
5.8
50
91
2
466
19
31
22
26
1.98
13731--14025
103
2.9
103
92
2
470
19
31
23
26
1.98
13731--14026
153
1.9
151
91
1
484
19
31
22
26
1.98
14121--14152
13
2.5
13
94
0
55
56
12
0
31
1.37
16814--17062
39
6.3
40
84
2
290
28
28
19
23
1.98
16814--17061
40
6.3
40
83
6
301
28
28
19
23
1.98
16814--17061
79
3.2
79
83
5
306
28
28
19
23
1.98
16818--17061
119
2.1
118
92
0
398
28
29
19
22
1.98
20102--20274
46
3.7
46
78
10
199
22
20
27
29
1.99
20099--20269
93
1.8
93
92
0
288
22
21
28
28
1.99
22124--22266
40
3.6
40
94
1
234
23
24
27
24
2.00
22124--22300
80
2.2
80
86
5
234
24
23
27
24
2.00
22527--22570
22
2.0
21
83
16
54
31
18
13
36
1.90
30085--30225
40
3.6
40
91
5
225
22
24
27
25
2.00
30085--30233
78
1.9
78
88
4
228
23
23
28
24
2.00
30483--30526
22
2.0
21
83
16
54
31
18
13
36
1.90
38122--38263
40
3.6
39
86
7
196
24
23
26
24
2.00

Tables:   1

The End!