Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold3348
Parameters: 2 7 7 80 10 50 1000
Length:  33283

Tables:   1   

This is table  1  of  1  ( 13 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
6262--6485
104
2.2
104
93
1
378
31
31
19
17
1.95
6814--6877
30
2.2
29
81
10
76
29
28
6
35
1.82
6821--6877
30
1.9
30
85
3
80
29
24
7
38
1.82
8919--9026
26
4.2
26
92
0
180
31
7
25
36
1.83
10651--10808
27
5.8
26
80
7
163
18
22
21
37
1.94
10651--10815
54
3.1
54
86
1
224
18
21
21
37
1.94
10651--10808
81
2.0
81
81
7
187
18
22
21
37
1.94
12907--12944
17
2.2
17
86
9
51
47
0
0
52
1.00
19357--19381
13
1.9
13
100
0
50
32
16
16
36
1.90
21259--21337
25
3.3
25
69
16
85
36
2
29
31
1.71
21234--21387
47
3.3
47
91
0
263
34
6
29
29
1.83
23897--23974
39
2.0
39
94
0
138
26
19
12
41
1.87
24036--24084
25
2.0
25
83
0
62
42
14
6
36
1.70

Tables:   1

The End!