Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold2793
Parameters: 2 7 7 80 10 50 1000
Length:  75405

Tables:   1   

This is table  1  of  1  ( 20 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
3374--3587
40
5.4
40
91
2
326
23
22
28
25
1.99
12596--12635
21
2.0
20
90
5
62
20
20
40
20
1.92
12980--13054
20
3.8
20
87
6
102
36
10
18
34
1.86
13104--13165
26
2.4
26
91
0
97
30
20
22
25
1.98
21710--21842
40
3.3
39
84
5
167
30
27
21
20
1.98
21732--21849
40
3.0
40
93
0
200
33
29
19
16
1.94
27209--27354
41
3.6
41
81
1
195
19
23
28
28
1.99
41539--41629
42
2.1
42
86
6
121
27
23
19
29
1.98
41539--41674
43
3.2
43
78
8
125
28
25
17
28
1.98
61138--61214
34
2.3
34
86
4
102
24
25
24
24
2.00
61151--61229
34
2.4
33
83
8
97
27
21
24
26
1.99
64823--64853
16
1.9
16
93
0
53
35
16
19
29
1.93
65610--65694
27
3.1
27
75
9
75
22
18
18
40
1.92
65725--65858
27
4.9
27
73
17
96
34
8
16
41
1.78
65813--65911
27
3.7
27
84
8
121
31
8
19
41
1.80
65722--65911
54
3.5
54
81
6
204
33
8
16
41
1.80
68051--68114
31
2.1
31
90
0
101
21
23
17
37
1.94
68329--68400
23
3.1
23
100
0
144
29
20
20
29
1.98
68452--68510
20
3.0
20
97
0
109
30
22
13
33
1.92
68554--68601
25
1.9
25
86
0
69
25
16
25
33
1.96

Tables:   1

The End!