Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold2305
Parameters: 2 7 7 80 10 50 1000
Length:  74675

Tables:   1   

This is table  1  of  1  ( 37 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1--77
30
2.6
30
73
8
84
28
25
16
28
1.97
1473--1535
21
3.0
21
88
2
90
30
3
33
33
1.74
6145--6182
10
3.7
10
86
6
58
31
0
34
34
1.58
6140--6202
21
3.0
21
90
2
90
30
1
33
34
1.67
7588--7649
10
5.9
10
74
10
52
33
32
3
30
1.74
7588--7650
21
3.0
21
88
2
90
33
33
3
30
1.74
14447--14492
20
2.4
19
85
3
65
21
10
36
30
1.88
14864--14908
14
3.3
14
78
6
56
35
0
15
48
1.45
15881--15940
29
2.1
29
93
0
102
41
30
0
28
1.56
15887--15934
15
3.3
15
73
5
53
43
27
0
29
1.55
17254--17301
18
2.7
18
83
0
60
60
0
25
14
1.34
17251--17328
24
3.2
24
76
7
86
60
0
26
12
1.33
18325--18368
21
2.0
22
86
4
63
34
34
6
25
1.82
21370--21414
14
3.3
14
78
6
56
35
0
15
48
1.45
22387--22446
29
2.1
29
93
0
102
41
30
0
28
1.56
22393--22440
15
3.3
15
73
5
53
43
27
0
29
1.55
23290--23329
19
2.1
19
85
0
53
25
35
17
22
1.95
37779--37915
55
2.5
55
98
1
267
33
16
26
24
1.95
39015--39069
16
3.4
17
87
7
87
80
3
3
12
0.98
39107--39186
30
2.6
30
84
11
101
76
2
10
11
1.12
39114--39186
29
2.5
29
86
6
94
79
2
8
9
1.03
39112--39186
31
2.6
30
83
8
93
78
2
9
9
1.05
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
40073--40131
21
2.8
21
87
5
75
71
0
22
6
1.09
40084--40131
15
3.3
14
82
5
60
77
0
18
4
0.93
42505--42638
55
2.6
53
91
8
222
33
16
26
23
1.96
49874--49917
22
2.0
22
90
0
70
22
36
4
36
1.75
51890--51933
22
2.0
22
95
0
79
34
4
36
25
1.76
52705--52751
20
2.3
20
85
0
67
29
36
12
21
1.91
55353--55458
48
2.2
47
85
9
135
59
1
24
14
1.45
57127--57173
20
2.3
20
85
0
67
29
36
12
21
1.91
62038--62091
17
3.2
17
81
0
63
7
12
3
75
1.14
64260--64309
13
4.0
12
81
5
55
22
6
2
70
1.20
64606--64649
22
2.0
22
95
0
79
34
4
36
25
1.76
71572--71610
18
2.1
19
85
4
53
58
20
5
15
1.55
74433--74480
22
2.1
22
84
7
60
6
25
4
64
1.35
74514--74570
21
2.8
21
82
15
59
7
22
1
68
1.23
74524--74570
20
2.2
22
85
14
64
8
23
0
68
1.17

Tables:   1

The End!