Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold2830
Parameters: 2 7 7 80 10 50 1000
Length:  64456

Tables:   1   

This is table  1  of  1  ( 25 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
16109--16160
11
4.9
11
79
9
63
30
28
0
40
1.57
16113--16150
20
1.9
20
94
0
67
34
26
0
39
1.57
16187--16217
15
2.1
15
93
0
53
22
6
0
70
1.09
17834--17897
30
2.1
30
85
0
83
31
46
15
6
1.71
17951--17993
18
2.4
18
92
0
68
16
27
11
44
1.82
18378--18859
116
4.2
116
95
0
865
40
3
8
47
1.52
18656--18838
54
3.2
54
72
17
190
42
2
7
48
1.42
20351--20389
3
13.0
3
100
0
78
66
0
0
33
0.92
25104--25642
126
4.3
126
90
0
837
27
20
18
33
1.96
25752--25924
96
1.8
96
86
3
251
40
14
1
43
1.56
25921--25962
15
2.6
17
85
11
61
54
23
0
21
1.44
27932--27966
3
11.7
3
100
0
70
65
0
0
34
0.93
27678--28096
217
2.0
201
85
8
547
51
7
5
35
1.54
28071--28095
3
8.3
3
100
0
50
68
0
0
32
0.90
28558--28590
16
2.1
16
94
0
57
54
3
6
36
1.41
29258--30354
384
2.8
386
87
4
1571
28
18
27
24
1.98
42518--42577
27
2.3
26
88
5
93
31
25
26
16
1.96
44531--44583
23
2.3
23
83
6
63
60
0
1
37
1.08
50279--50311
12
2.7
13
86
13
52
0
6
6
87
0.65
50277--50310
11
3.0
11
95
4
59
0
2
8
88
0.62
50474--50516
18
2.3
18
84
11
52
23
0
11
65
1.25
52248--52330
31
2.6
31
80
3
85
61
18
3
16
1.48
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
56605--56652
24
2.1
23
85
11
64
54
0
14
31
1.41
57133--57288
41
3.8
41
89
6
235
28
20
22
28
1.98
57503--57600
33
2.9
33
84
7
108
30
10
22
36
1.87

Tables:   1

The End!