Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold531
Parameters: 2 7 7 80 10 50 1000
Length:  54309

Tables:   1   

This is table  1  of  1  ( 15 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
3605--3767
41
4.0
41
85
0
209
34
17
27
19
1.95
13801--13985
40
4.6
40
81
8
223
25
29
21
23
1.99
13793--13985
83
2.4
80
86
3
271
26
29
21
22
1.99
21923--22147
40
5.6
39
83
7
272
26
28
22
22
1.99
21923--22147
83
2.8
80
87
4
335
26
28
22
22
1.99
24827--25121
41
7.2
41
70
9
172
37
15
25
21
1.93
24876--25054
81
2.2
81
79
8
195
37
15
24
22
1.93
24919--25115
82
2.4
81
79
10
199
39
14
23
22
1.91
27732--27913
40
4.6
40
93
1
294
29
26
20
23
1.99
30393--30577
40
4.6
40
80
3
210
22
27
24
25
2.00
30357--30577
121
1.8
118
84
4
300
22
26
24
26
2.00
35331--35355
11
2.3
11
100
0
50
24
0
20
56
1.43
36597--36694
28
3.5
28
83
8
119
30
26
15
27
1.96
44585--44683
28
3.5
29
83
6
114
30
27
15
27
1.96
52412--52508
28
3.5
27
86
9
126
31
25
15
26
1.96

Tables:   1

The End!