Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold791
Parameters: 2 7 7 80 10 50 1000
Length:  54153

Tables:   1   

This is table  1  of  1  ( 26 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
7137--7198
32
1.9
32
96
0
115
29
9
22
38
1.86
15370--15443
6
13.2
6
76
21
72
47
17
1
33
1.56
15367--15428
5
12.0
5
76
17
56
46
17
1
33
1.58
15366--15442
11
7.5
11
79
15
94
46
18
1
33
1.57
15366--15442
20
3.8
21
83
16
108
46
18
1
33
1.57
15440--15467
14
2.0
14
100
0
56
71
0
14
14
1.15
23722--23815
18
5.4
18
92
3
131
36
25
9
28
1.87
23722--23802
9
9.0
9
70
0
54
34
27
9
28
1.89
26175--26263
21
4.1
21
84
5
90
53
10
23
12
1.68
26175--26243
21
3.3
21
87
2
95
55
8
24
11
1.64
30401--30429
14
2.1
14
100
0
58
51
6
13
27
1.66
32803--32860
29
2.0
29
89
0
89
41
6
18
32
1.78
36125--36157
16
2.1
16
94
0
57
39
9
12
39
1.74
36623--36656
15
2.3
15
89
0
50
35
2
23
38
1.70
37657--37695
19
2.1
19
90
0
60
30
15
2
51
1.57
39381--39409
14
2.1
14
100
0
58
34
0
13
51
1.42
39534--39573
21
1.9
21
89
0
62
27
15
0
57
1.38
40166--40190
11
2.3
11
100
0
50
64
8
0
28
1.22
41173--41230
21
2.7
22
89
10
93
67
17
15
0
1.24
47112--47722
215
2.8
214
89
4
907
47
14
14
23
1.80
49342--49375
4
8.8
4
90
6
52
79
20
0
0
0.73
50165--50216
27
1.9
27
96
0
95
57
11
11
19
1.63
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
50210--50420
52
3.9
52
70
18
137
45
16
10
27
1.80
50220--50436
111
1.9
115
88
3
334
46
15
11
26
1.80
50786--50829
10
4.3
10
94
2
61
31
25
9
34
1.87
52324--52372
24
2.0
25
88
4
73
32
16
20
30
1.94

Tables:   1

The End!