Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold1610
Parameters: 2 7 7 80 10 50 1000
Length:  53972

Tables:   1   

This is table  1  of  1  ( 11 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
15740--15851
43
2.6
43
80
2
109
25
16
25
33
1.96
15740--15896
86
1.8
85
82
4
199
26
15
25
32
1.95
16962--17025
29
2.2
29
91
0
101
17
21
42
18
1.89
19044--19073
16
1.9
15
93
6
51
26
13
23
36
1.92
19080--19109
15
1.9
16
93
6
53
33
0
26
40
1.57
28368--28535
38
4.4
38
91
2
230
32
27
20
19
1.97
32511--32572
31
2.0
31
96
0
115
32
22
1
43
1.63
33430--33534
51
2.1
51
98
0
201
36
10
13
40
1.79
43370--43488
27
4.4
27
81
0
139
36
18
21
24
1.95
44135--44194
27
2.3
27
85
2
77
21
23
20
35
1.96
47625--47723
28
3.5
28
87
4
119
27
15
27
30
1.96

Tables:   1

The End!