Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold2372
Parameters: 2 7 7 80 10 50 1000
Length:  50278

Tables:   1   

This is table  1  of  1  ( 28 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
47--217
45
3.9
44
78
13
176
16
30
32
20
1.95
878--1128
42
5.9
42
80
9
278
20
34
28
17
1.95
9031--9123
42
2.2
43
90
3
143
19
39
27
12
1.88
9111--9159
25
2.0
25
91
0
80
18
46
22
12
1.82
9136--10171
43
24.6
41
76
8
755
18
33
32
16
1.93
9158--9236
34
2.3
34
93
2
131
18
37
35
7
1.80
9165--10171
128
8.0
128
77
7
884
17
33
32
16
1.93
9370--10035
298
2.2
298
94
1
1156
17
33
32
16
1.93
9200--10171
85
11.5
84
81
4
863
17
33
32
16
1.93
10176--10254
24
3.3
24
85
5
106
20
35
37
6
1.78
10463--10754
42
6.9
42
82
8
335
19
34
28
17
1.95
14153--14246
48
2.0
48
83
8
120
40
23
12
23
1.89
19172--19264
47
2.0
48
83
10
120
40
23
12
22
1.89
24286--24378
42
2.2
43
90
3
143
19
39
27
12
1.88
24366--24414
25
2.0
25
91
0
80
18
46
22
12
1.82
24391--25428
43
24.6
42
76
8
849
17
33
32
16
1.93
24413--24491
34
2.3
34
93
2
131
18
37
35
7
1.80
24499--25415
85
10.8
84
82
5
725
17
33
32
16
1.93
24420--25428
128
8.0
128
77
6
920
17
33
32
16
1.93
24625--25357
298
2.5
298
92
2
1181
17
33
32
16
1.93
25433--25511
24
3.3
24
85
5
106
20
35
37
6
1.78
25720--26011
42
6.9
42
82
8
335
19
34
28
17
1.95
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
38231--38264
17
1.9
17
88
5
50
44
5
5
44
1.52
39811--40066
132
1.9
132
91
0
422
26
22
17
32
1.96
39992--40175
44
4.2
44
89
1
271
27
26
15
29
1.96
42679--42821
72
2.0
71
93
1
241
27
18
18
34
1.95
46463--46539
24
3.2
24
87
3
111
18
35
40
6
1.76
46747--47038
42
6.9
42
82
7
342
19
34
28
17
1.95

Tables:   1

The End!