Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold3390
Parameters: 2 7 7 80 10 50 1000
Length:  45480

Tables:   1   

This is table  1  of  1  ( 15 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
233--423
39
5.0
40
84
8
227
25
19
27
27
1.99
231--421
79
2.5
74
84
5
240
25
19
27
27
1.99
7440--7702
40
6.6
40
87
3
316
24
20
28
26
1.99
7479--7737
80
3.3
80
84
3
238
25
20
28
25
1.99
15074--15102
13
2.2
13
100
0
58
55
13
0
31
1.39
18079--18254
46
3.9
44
77
12
194
22
21
26
28
1.99
18076--18246
92
1.9
92
92
0
288
22
22
27
28
1.99
21172--21240
15
4.6
15
83
0
84
11
17
13
57
1.64
21163--21250
30
3.0
30
81
8
99
10
17
15
56
1.66
23591--23766
46
3.8
46
76
14
182
23
20
26
28
1.99
23587--23758
93
1.8
93
91
2
283
23
20
27
27
1.99
28025--28249
40
5.6
40
82
2
272
22
26
24
25
2.00
37932--37969
19
2.0
20
85
15
53
36
0
23
39
1.55
44823--44987
89
1.8
91
88
2
253
27
28
23
21
1.99
44914--45002
44
2.0
43
82
6
108
25
31
23
19
1.98

Tables:   1

The End!