Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold2436
Parameters: 2 7 7 80 10 50 1000
Length:  44098

Tables:   1   

This is table  1  of  1  ( 18 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
5--191
66
2.8
66
83
10
208
34
16
27
21
1.95
7515--7672
68
2.3
67
97
0
262
31
14
30
24
1.95
7667--7747
40
2.0
40
100
0
162
38
14
27
19
1.91
10972--11047
23
3.5
22
75
19
63
67
5
6
21
1.34
10972--11023
23
2.3
23
84
15
65
67
3
7
21
1.32
15924--15961
19
2.0
19
85
10
51
68
0
10
21
1.19
19583--19634
21
2.4
22
84
12
63
67
1
21
9
1.29
20538--20671
67
2.0
67
98
0
259
28
12
23
35
1.92
21559--21611
26
2.1
25
85
3
70
33
9
15
41
1.79
22354--22402
11
4.5
11
75
14
57
44
18
20
16
1.86
24301--24340
14
2.9
14
88
0
53
50
7
32
10
1.64
25845--26018
45
3.8
44
80
9
206
21
20
29
28
1.98
28966--29021
15
3.7
15
88
7
87
12
16
10
60
1.58
31414--31587
46
3.8
45
80
9
217
21
20
29
28
1.98
35598--35694
30
3.2
30
71
8
90
27
15
28
27
1.96
38484--38687
27
7.6
27
85
3
241
30
27
14
26
1.95
38484--38687
82
2.5
81
82
4
241
30
27
14
26
1.95
38482--38686
109
1.9
108
86
4
290
30
27
14
26
1.95

Tables:   1

The End!