Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold1722
Parameters: 2 7 7 80 10 50 1000
Length:  53135

Tables:   1   

This is table  1  of  1  ( 20 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
6666--6817
80
1.9
80
87
5
227
27
16
27
28
1.97
6666--6839
27
6.5
27
83
5
192
27
16
27
29
1.97
12607--12631
13
1.9
13
100
0
50
20
0
0
80
0.72
15844--15925
26
3.2
26
91
0
128
31
7
24
36
1.83
17274--17381
26
4.2
26
92
0
171
32
7
24
36
1.83
18730--18837
26
4.2
26
92
0
171
32
7
24
36
1.83
20189--20296
26
4.2
26
92
0
171
32
7
24
36
1.83
21647--21754
26
4.2
26
92
0
171
32
7
24
36
1.83
23105--23212
26
4.2
26
93
0
189
32
7
24
36
1.83
24565--24620
26
2.2
26
100
0
112
30
7
26
35
1.83
25973--26080
26
4.2
26
92
0
180
33
6
24
36
1.81
27659--27786
27
4.7
28
81
12
160
19
25
21
33
1.97
27659--27784
54
2.3
54
93
0
207
19
25
22
33
1.97
35755--35948
47
4.1
47
89
0
280
32
11
28
26
1.91
35784--35855
22
3.1
22
64
24
58
33
13
29
23
1.93
36152--36260
37
2.9
37
91
0
164
24
18
29
27
1.98
38542--38691
42
3.6
42
81
4
169
27
23
18
30
1.98
42990--43137
38
3.8
38
82
5
154
35
9
10
43
1.72
45137--45165
8
3.6
8
100
0
58
24
13
27
34
1.93
45253--45327
23
3.3
23
90
3
125
21
21
24
33
1.97

Tables:   1

The End!