Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold988
Parameters: 2 7 7 80 10 50 1000
Length:  62075

Tables:   1   

This is table  1  of  1  ( 17 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
7267--7413
54
2.7
54
79
6
156
27
27
15
29
1.96
7267--7412
27
5.4
27
76
8
129
27
28
15
28
1.96
10078--10254
67
2.7
66
81
7
189
31
15
31
20
1.94
20760--20809
25
2.0
25
100
0
100
56
8
8
28
1.57
24051--24230
49
3.7
49
77
2
166
25
29
20
25
1.99
24051--24230
98
1.8
97
85
3
254
25
29
20
25
1.99
24781--24831
20
2.7
18
82
14
59
39
19
0
41
1.52
26889--27198
147
2.1
147
95
0
557
23
28
21
25
1.99
33730--33896
43
3.9
43
92
1
266
31
32
23
11
1.91
35235--35457
27
8.5
27
81
10
203
29
27
15
27
1.96
35365--35407
21
2.2
20
87
8
61
25
27
13
32
1.94
35315--35456
73
1.9
74
84
5
189
27
27
16
28
1.97
43225--43428
27
7.6
27
85
4
250
29
27
15
26
1.96
43225--43428
55
3.8
54
82
4
250
29
27
15
26
1.96
43225--43428
82
2.5
80
83
4
248
29
27
15
26
1.96
51168--51371
27
7.6
27
86
2
248
29
27
15
27
1.96
56070--56235
40
4.2
40
92
2
264
22
21
28
27
1.99

Tables:   1

The End!