Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold2970
Parameters: 2 7 7 80 10 50 1000
Length:  55034

Tables:   1   

This is table  1  of  1  ( 22 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
653--903
126
2.0
120
86
8
346
31
17
18
33
1.94
4545--4720
46
3.8
45
81
10
212
21
21
29
28
1.98
4541--4712
93
1.8
93
94
0
308
20
21
30
27
1.98
7615--7691
15
5.4
14
77
10
68
10
16
12
59
1.60
10065--10240
46
3.8
45
81
10
212
21
21
29
28
1.98
10061--10232
93
1.8
93
94
0
308
20
21
30
27
1.98
13677--13774
50
1.9
51
86
10
139
42
7
16
33
1.75
22532--22585
25
2.2
25
93
0
90
24
12
22
40
1.89
22762--23037
48
5.8
48
71
10
181
26
20
24
27
1.99
27774--27952
70
2.6
70
78
0
196
26
24
21
27
1.99
29678--29748
24
3.0
24
95
0
124
35
1
38
25
1.65
29678--29771
48
1.9
48
81
10
111
35
4
37
23
1.75
31165--31277
27
4.1
27
81
10
124
18
22
23
36
1.95
42229--42262
17
2.0
17
88
0
50
32
5
14
47
1.69
42825--42850
10
2.6
10
100
0
52
57
23
11
7
1.59
43989--44072
28
3.2
28
65
25
83
23
16
29
29
1.96
43941--44129
50
3.8
49
84
1
216
25
17
26
30
1.97
47253--47424
46
3.8
45
79
11
206
21
20
27
29
1.98
47250--47419
92
1.8
92
94
0
304
21
21
28
28
1.98
47649--47686
19
2.0
20
85
15
53
36
0
23
39
1.55
54752--54923
46
3.8
45
79
11
206
21
20
27
29
1.98
54749--54918
92
1.8
92
94
0
304
21
21
28
28
1.98

Tables:   1

The End!