Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold2553
Parameters: 2 7 7 80 10 50 1000
Length:  52705

Tables:   1   

This is table  1  of  1  ( 11 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
17491--17670
41
4.5
39
78
8
161
26
26
22
25
2.00
17514--17611
38
2.5
40
85
6
128
28
26
19
25
1.99
23141--23357
79
2.7
79
90
2
319
27
27
21
23
1.99
23141--23345
40
5.2
40
92
1
315
27
27
21
23
1.99
31069--31285
79
2.7
79
85
6
278
28
27
21
23
1.99
31099--31273
40
4.4
40
93
1
280
28
27
21
22
1.99
37463--37514
28
1.9
27
84
7
70
71
7
3
17
1.25
46649--46761
43
2.7
43
78
15
112
30
24
16
27
1.97
48536--48752
40
5.5
40
91
3
316
24
23
27
24
2.00
48532--48752
119
1.9
119
87
5
331
25
22
27
24
2.00
52245--52315
35
2.0
35
100
0
142
35
16
30
16
1.92

Tables:   1

The End!