Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold2007
Parameters: 2 7 7 80 10 50 1000
Length:  53116

Tables:   1   

This is table  1  of  1  ( 18 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
5924--6154
40
5.8
40
87
2
304
24
23
27
23
2.00
12466--12490
13
1.9
13
100
0
50
48
8
0
44
1.32
15418--15497
6
13.0
6
75
10
63
80
1
5
13
0.95
15397--15497
6
19.6
5
75
18
59
77
0
3
17
0.98
15418--15497
25
3.2
25
79
8
92
80
1
5
13
0.95
15398--15494
49
2.0
49
83
6
124
78
1
4
16
0.96
17266--17441
46
3.8
46
79
12
216
20
21
29
28
1.98
17263--17434
93
1.8
93
96
0
317
20
21
29
27
1.98
19399--19444
24
2.0
23
82
4
56
41
10
19
28
1.85
24804--24979
46
3.8
46
76
12
180
21
21
27
29
1.98
24801--24972
93
1.8
93
91
0
281
21
22
27
28
1.99
27802--27854
21
2.5
21
84
0
70
26
7
33
32
1.84
28265--28309
17
2.6
17
78
0
63
51
0
0
48
1.00
52175--52274
5
19.2
5
72
22
66
20
5
1
74
1.07
52175--52274
18
5.1
19
72
19
80
20
5
1
74
1.07
52175--52274
12
9.0
11
70
19
66
20
5
1
74
1.07
52175--52220
16
3.1
15
82
14
51
19
4
0
76
0.96
52188--52269
6
13.2
6
74
7
65
19
4
1
74
1.07

Tables:   1

The End!