Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold1008
Parameters: 2 7 7 80 10 50 1000
Length:  50950

Tables:   1   

This is table  1  of  1  ( 17 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2771--2803
15
2.2
16
89
10
52
9
39
12
39
1.74
5422--5451
15
2.0
15
100
0
60
40
26
13
20
1.89
6439--6568
59
2.2
58
79
8
147
39
10
18
32
1.84
15473--15504
16
2.0
16
100
0
64
18
12
31
37
1.88
23542--23577
16
2.2
16
90
9
56
58
8
11
22
1.59
23890--23936
3
15.7
3
81
0
58
61
0
6
31
1.21
24093--24189
3
32.3
3
70
17
51
60
3
5
30
1.34
25637--25699
31
2.0
32
84
9
85
47
0
4
47
1.23
25801--25856
15
3.5
15
75
20
51
71
3
19
5
1.21
30694--31014
86
3.7
88
79
10
338
19
21
22
36
1.95
40344--40444
18
5.6
18
78
11
91
36
9
15
37
1.81
40434--40627
18
10.4
18
69
13
97
35
12
14
37
1.85
40332--40614
54
5.1
54
71
11
203
36
12
15
36
1.84
40332--40627
36
8.0
36
70
11
161
35
11
15
37
1.84
42378--42500
45
2.8
44
83
3
147
39
12
24
23
1.89
42529--42623
27
3.5
27
78
5
86
45
14
17
22
1.85
42580--42672
27
3.4
27
80
5
91
44
17
18
20
1.87

Tables:   1

The End!