Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold1999
Parameters: 2 7 7 80 10 50 1000
Length:  49337

Tables:   1   

This is table  1  of  1  ( 22 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1543--1639
33
2.8
33
84
7
106
37
22
10
29
1.87
1853--2001
42
3.6
42
90
6
232
29
22
20
27
1.98
1853--2010
83
1.9
83
88
5
239
29
22
20
28
1.98
3042--3089
25
1.9
25
86
0
69
45
16
4
33
1.67
9170--9267
33
2.9
33
84
7
108
36
22
10
30
1.87
9482--9637
41
3.8
41
89
6
235
28
22
20
28
1.98
10120--10167
24
2.1
23
85
11
64
31
14
0
54
1.41
16806--16902
33
2.8
33
84
7
106
37
22
10
29
1.87
17116--17271
41
3.8
41
89
6
235
28
22
20
28
1.98
19649--19684
18
1.9
18
88
5
54
72
8
2
16
1.21
20758--20896
30
4.9
30
67
18
109
20
23
29
25
1.99
20736--20898
81
2.0
81
98
0
317
22
22
28
26
1.99
24133--24201
18
3.8
18
75
5
59
46
17
5
30
1.71
24216--24261
14
3.2
14
87
9
58
26
0
0
73
0.83
24276--24310
18
1.9
18
94
0
61
8
0
45
45
1.34
24972--25111
70
2.0
70
100
0
280
41
8
5
44
1.59
28025--28049
12
2.1
12
100
0
50
84
0
0
16
0.63
40687--40772
19
4.2
19
80
16
100
33
17
10
38
1.84
40687--40771
43
1.9
45
92
4
147
34
16
10
38
1.83
42729--42793
34
2.0
34
84
6
89
33
26
13
26
1.94
43101--43150
26
1.9
27
84
8
68
24
14
22
40
1.90
44623--44730
26
4.2
26
93
0
189
36
24
7
32
1.83

Tables:   1

The End!