Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold1594
Parameters: 2 7 7 80 10 50 1000
Length:  47677

Tables:   1   

This is table  1  of  1  ( 15 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
7021--7092
37
1.9
38
83
10
96
26
20
26
26
1.99
6983--7092
37
2.9
37
79
14
95
27
21
26
24
1.99
14269--14396
40
3.3
39
78
11
147
24
23
27
25
2.00
14269--14429
79
2.1
76
81
8
182
26
22
26
24
2.00
20450--20488
19
2.1
18
85
4
51
46
5
7
41
1.55
24236--24420
79
2.3
82
83
7
229
24
27
22
24
2.00
24217--24420
40
5.1
40
81
8
229
24
27
22
25
2.00
31767--31890
47
2.6
47
90
0
194
19
18
32
29
1.96
34801--34981
40
4.6
40
81
8
201
25
21
27
25
1.99
34850--35014
79
2.1
79
83
6
201
26
21
27
24
1.99
38221--38530
46
6.6
46
79
9
256
24
27
19
28
1.99
38221--38530
92
3.3
94
81
9
291
24
27
19
28
1.99
41744--41879
49
2.7
50
80
8
170
24
30
19
25
1.98
41862--41969
46
2.4
44
89
4
153
25
30
18
25
1.98
45349--45421
27
2.7
27
80
4
85
35
12
26
26
1.91

Tables:   1

The End!