Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold839
Parameters: 2 7 7 80 10 50 1000
Length:  45561

Tables:   1   

This is table  1  of  1  ( 16 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
4977--5029
23
2.4
22
76
20
56
9
18
1
69
1.25
12047--12072
13
2.0
13
100
0
52
46
7
0
46
1.31
12462--12500
20
1.9
21
89
5
62
35
12
28
23
1.91
15453--15491
15
2.4
15
87
12
51
66
2
20
10
1.33
18676--18705
11
2.7
11
100
0
60
80
6
6
6
1.04
32078--32285
103
2.0
103
98
0
398
30
31
15
23
1.95
32856--32902
20
2.3
20
85
0
67
29
36
12
21
1.91
34570--34616
20
2.3
20
85
0
67
29
36
12
21
1.91
35646--35689
22
2.0
22
95
0
79
34
4
36
25
1.76
38647--38707
28
2.3
26
81
13
70
73
4
16
4
1.18
40287--40347
14
4.5
13
72
11
52
72
3
18
6
1.21
41371--41411
21
2.0
21
90
0
64
75
4
14
4
1.14
41383--41500
6
19.2
6
67
14
62
71
4
18
5
1.24
41450--41506
14
4.3
13
75
16
55
70
1
19
8
1.23
41404--41489
19
4.6
18
72
8
73
69
2
19
8
1.25
41567--41669
45
2.2
46
85
11
131
58
1
25
14
1.47

Tables:   1

The End!