Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold438
Parameters: 2 7 7 80 10 50 1000
Length:  45560

Tables:   1   

This is table  1  of  1  ( 19 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1474--1553
40
2.0
40
97
0
151
38
17
16
27
1.91
7383--7425
22
2.0
22
85
0
59
67
2
9
20
1.30
9676--9859
39
4.7
40
87
6
234
26
27
21
24
1.99
27567--28254
47
14.6
47
93
3
1161
32
8
29
29
1.87
27567--28254
95
7.3
96
95
2
1186
32
8
29
29
1.87
28373--28470
37
2.8
35
89
4
135
26
18
28
26
1.98
29759--30006
79
3.1
79
92
0
379
25
21
27
26
1.99
29759--30006
40
6.2
40
91
3
367
25
21
27
26
1.99
34018--34753
47
15.6
47
94
2
1260
32
8
29
29
1.87
34872--34973
37
2.8
37
89
3
152
25
17
29
27
1.98
36014--36045
16
2.0
16
93
0
55
34
37
9
18
1.83
37651--37688
19
2.0
20
85
15
53
39
23
0
36
1.55
37913--38038
46
2.7
46
88
0
189
31
28
19
20
1.97
40337--40486
43
3.5
44
76
15
152
33
24
16
26
1.95
40337--40472
42
3.2
41
84
7
148
31
24
17
26
1.97
42444--42482
14
2.6
16
88
8
55
38
2
20
38
1.66
42696--42786
45
2.0
45
91
0
146
24
9
29
36
1.88
42704--42806
45
2.3
45
86
3
145
21
11
31
35
1.89
44708--44861
76
2.0
76
92
0
254
24
18
28
28
1.98

Tables:   1

The End!