Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold2431
Parameters: 2 7 7 80 10 50 1000
Length:  44568

Tables:   1   

This is table  1  of  1  ( 38 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2718--2775
27
2.3
26
79
8
66
0
41
1
56
1.09
3380--3416
7
5.1
7
96
3
65
54
0
0
45
1.00
3683--3722
7
5.7
7
81
0
53
30
55
0
15
1.41
3673--3770
14
6.9
14
76
3
70
36
39
2
21
1.65
3717--3770
22
2.5
22
80
14
67
42
31
1
24
1.65
3735--3765
15
2.1
15
93
0
53
41
38
0
19
1.51
3775--3820
21
2.2
21
88
0
65
45
28
0
26
1.54
3919--3980
22
2.9
20
79
11
52
43
30
3
22
1.69
3944--3994
14
3.6
14
75
2
57
47
31
5
15
1.70
3940--3980
21
2.0
21
85
0
55
46
31
4
17
1.69
3972--4046
21
3.4
21
78
10
62
37
41
4
17
1.68
4001--4060
25
2.4
26
81
15
74
36
45
1
16
1.58
4411--4560
79
1.9
81
84
2
205
26
20
21
32
1.98
4549--4573
12
2.1
12
100
0
50
40
36
16
8
1.77
7822--7853
10
3.2
10
95
0
55
50
0
21
28
1.49
9569--9636
26
2.6
27
80
2
84
33
17
20
27
1.95
9621--9959
27
12.6
27
76
10
178
39
18
9
31
1.83
10227--10351
41
3.0
41
88
0
196
22
21
28
28
1.99
14788--14866
39
2.0
39
97
0
149
48
7
20
24
1.75
16120--16266
24
5.8
24
79
13
152
48
12
16
21
1.79
16143--16218
31
2.5
31
87
6
111
48
14
17
19
1.81
16120--16294
79
2.2
79
93
0
296
48
12
17
22
1.79
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
16120--16269
6
24.8
6
71
16
114
49
12
16
22
1.78
16413--16469
27
2.1
27
87
3
80
38
22
24
14
1.91
16650--16708
22
2.7
22
81
0
64
32
22
25
20
1.98
16796--16878
27
3.1
26
84
5
103
36
21
22
19
1.95
17079--17265
81
2.3
81
84
1
232
26
19
17
36
1.94
17078--17272
27
7.2
27
80
4
196
27
18
17
36
1.94
17076--17265
54
3.5
54
85
1
247
26
18
18
36
1.94
17277--17759
27
17.9
27
82
5
564
40
8
22
28
1.83
21100--21321
67
3.4
65
74
11
211
24
28
14
31
1.95
27101--27309
53
3.9
54
77
6
210
21
24
18
35
1.95
27104--27302
108
1.8
108
87
4
294
21
25
19
34
1.96
27058--27309
53
4.8
52
76
8
192
20
24
18
36
1.95
34533--34701
39
4.4
40
91
7
287
21
18
30
28
1.97
34533--34695
77
2.1
78
93
5
287
22
19
30
28
1.98
34565--34725
40
4.1
40
79
5
114
23
20
29
26
1.99
43005--43173
39
4.4
39
91
3
272
22
18
30
28
1.97

Tables:   1

The End!