Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold1004
Parameters: 2 7 7 80 10 50 1000
Length:  44396

Tables:   1   

This is table  1  of  1  ( 8 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1947--2095
40
3.7
40
86
5
160
26
20
25
27
1.99
10061--10193
40
3.3
40
87
6
171
25
20
26
27
1.99
13241--13307
33
2.0
33
97
0
125
38
10
17
32
1.84
26313--26438
29
4.4
28
75
9
130
28
15
30
26
1.96
29193--29262
28
2.6
27
86
2
86
28
20
28
22
1.98
29138--29289
55
2.8
53
81
4
178
28
16
27
26
1.97
29139--29294
27
5.7
27
78
6
145
28
16
28
27
1.97
42552--42663
43
2.6
43
81
6
147
28
22
19
29
1.98

Tables:   1

The End!