Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold2686
Parameters: 2 7 7 80 10 50 1000
Length:  41464

Tables:   1   

This is table  1  of  1  ( 13 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
125--240
57
2.0
57
100
0
232
34
22
23
19
1.97
3022--3073
23
2.3
22
75
21
54
9
23
1
65
1.32
9071--9119
20
2.3
20
82
10
53
32
8
14
44
1.74
10144--10207
26
2.4
26
84
5
74
32
25
12
29
1.92
10324--10399
27
2.8
26
76
9
71
18
26
21
34
1.96
14749--14793
14
3.3
14
78
6
56
35
0
15
48
1.45
15773--15829
29
2.0
29
85
0
78
43
33
0
22
1.54
17140--17189
18
2.8
18
87
0
73
58
0
28
14
1.37
17137--17214
24
3.2
24
79
0
93
58
0
28
12
1.34
19667--19711
14
3.3
14
78
6
56
35
0
15
48
1.45
21962--21996
18
1.9
18
94
0
61
74
11
5
8
1.22
34997--35041
14
3.3
14
78
6
56
35
0
15
48
1.45
41360--41387
14
2.0
14
100
0
56
28
14
7
50
1.69

Tables:   1

The End!