Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold295
Parameters: 2 7 7 80 10 50 1000
Length:  40738

Tables:   1   

This is table  1  of  1  ( 22 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
361--514
76
2.0
76
91
0
245
29
27
18
24
1.98
2402--2518
45
2.6
45
83
2
146
34
31
14
19
1.92
2737--2775
14
2.6
16
88
8
55
38
20
2
38
1.66
4745--4879
42
3.1
44
77
15
140
26
16
24
32
1.96
7178--7303
46
2.7
46
91
0
198
21
20
26
30
1.98
7526--7563
19
2.0
20
85
15
53
36
0
23
39
1.55
9163--9194
16
2.0
16
93
0
55
18
9
37
34
1.83
10235--10336
37
2.8
37
92
0
159
27
29
17
25
1.98
10455--11194
47
15.6
47
93
2
1255
29
29
8
33
1.87
10455--11194
143
5.2
141
95
1
1255
29
29
8
33
1.87
10455--11194
190
3.9
188
94
1
1255
29
29
8
33
1.87
17750--17775
13
2.0
13
100
0
52
15
30
38
15
1.88
22904--23088
40
4.7
40
87
6
243
23
22
27
26
1.99
22904--23088
79
2.3
81
86
4
252
23
22
27
26
1.99
22905--23121
79
2.7
79
83
5
226
25
21
27
25
2.00
22904--23121
119
1.8
119
81
7
273
25
21
27
26
1.99
30955--31140
40
4.7
40
88
5
252
24
22
27
26
2.00
31008--31173
80
2.1
79
86
5
228
25
20
27
26
1.99
33392--33434
22
2.0
22
85
0
59
20
9
2
67
1.30
33392--33433
10
3.8
11
81
12
50
19
9
2
69
1.28
37161--37234
34
2.2
34
82
4
96
25
21
21
31
1.98
39264--39343
40
2.0
40
97
0
151
27
16
17
38
1.91

Tables:   1

The End!