Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold2903
Parameters: 2 7 7 80 10 50 1000
Length:  40585

Tables:   1   

This is table  1  of  1  ( 18 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
3903--3934
16
1.9
17
93
6
57
68
12
0
18
1.20
3943--3991
14
3.5
14
80
0
62
75
4
14
6
1.14
3931--4010
28
2.8
28
84
1
97
71
3
15
10
1.27
4882--4916
18
1.9
18
88
11
54
57
0
20
22
1.41
7586--7618
11
2.9
11
95
4
57
81
6
3
9
0.95
8806--8911
48
2.2
47
85
9
135
59
1
24
14
1.45
10579--10625
20
2.3
20
85
0
67
29
36
12
21
1.91
12316--12362
20
2.3
20
85
0
67
21
12
36
29
1.91
13585--13642
10
5.7
10
76
11
64
29
27
13
29
1.94
13585--13645
20
3.0
20
83
9
79
27
26
13
32
1.93
17282--17320
19
2.0
20
90
5
62
28
15
30
25
1.96
17297--17407
54
2.1
54
92
0
186
34
15
27
23
1.94
18850--19181
80
4.1
80
85
1
405
31
9
19
39
1.84
18850--19189
27
12.7
27
83
3
400
31
9
19
39
1.83
27802--27836
17
2.1
17
89
10
54
51
5
0
42
1.25
30882--30907
11
2.4
11
100
0
52
15
0
7
76
0.99
33500--33529
15
1.9
16
93
6
53
16
26
0
56
1.40
36419--36471
23
2.4
22
76
20
56
9
18
1
69
1.25

Tables:   1

The End!