Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold2910
Parameters: 2 7 7 80 10 50 1000
Length:  52863

Tables:   1   

This is table  1  of  1  ( 23 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1251--1415
77
2.1
77
85
6
219
24
28
21
24
1.99
1216--1468
39
6.5
39
79
11
225
24
28
21
26
1.99
1216--1468
117
2.2
117
79
7
257
24
28
21
26
1.99
9078--9247
39
4.3
40
85
5
204
26
28
20
25
1.99
9078--9290
79
2.7
77
77
7
203
26
27
19
25
1.99
9232--9309
40
1.9
41
82
10
97
26
28
20
24
1.99
11561--11691
40
3.3
40
88
2
192
23
19
27
29
1.99
11561--11728
40
4.2
38
80
9
158
24
20
27
27
1.99
16678--16940
46
5.6
47
72
15
181
28
17
30
24
1.97
16680--16890
93
2.3
90
82
9
232
27
18
30
24
1.97
23694--23724
15
2.1
15
100
0
62
35
25
6
32
1.82
24099--24414
46
6.7
48
75
12
230
22
30
20
26
1.98
24099--24414
140
2.2
142
81
8
358
22
30
20
26
1.98
24154--24421
94
2.9
93
79
10
289
23
30
19
26
1.98
25068--25118
19
2.7
19
82
8
61
41
19
0
39
1.52
30879--30949
36
1.9
37
94
2
126
30
14
21
33
1.92
32138--32281
40
3.6
40
84
5
175
25
25
25
24
2.00
38127--38170
11
3.8
11
80
11
52
31
0
4
63
1.14
41440--41661
40
5.6
40
85
4
236
24
21
27
26
1.99
41515--41696
78
2.3
80
82
3
226
25
20
28
25
1.99
49314--49536
40
5.6
40
86
3
245
24
20
27
26
1.99
49389--49571
79
2.3
80
82
1
226
25
20
27
25
1.99
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
52567--52620
1
54.0
1
96
0
99
1
0
0
98
0.13

Tables:   1

The End!