Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold1923
Parameters: 2 7 7 80 10 50 1000
Length:  99926

Tables:   1   

This is table  1  of  1  ( 30 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
60--321
118
2.2
120
95
3
465
26
25
21
26
1.99
23--322
40
7.5
39
73
14
184
26
25
22
25
2.00
5973--6147
46
3.8
45
76
13
185
21
20
28
29
1.98
5970--6140
93
1.8
93
91
0
279
21
21
28
28
1.98
13537--13713
46
3.9
45
75
15
168
22
20
28
28
1.99
17199--17255
30
1.9
30
96
0
105
26
12
28
33
1.92
20647--20703
30
1.9
30
92
0
96
26
14
26
33
1.94
22111--22163
27
2.0
27
88
0
79
37
22
13
26
1.91
22589--22653
27
2.4
28
84
5
89
16
23
23
36
1.94
31228--31499
40
6.8
40
93
1
454
26
21
29
23
1.99
31220--31499
122
2.3
122
93
1
467
26
21
28
23
1.99
39681--39952
40
6.8
40
93
1
454
26
21
29
23
1.99
39673--39952
122
2.3
122
93
1
467
26
21
28
23
1.99
50730--50840
40
2.8
40
78
10
111
30
28
15
25
1.96
50700--51118
218
1.9
219
89
1
653
33
24
14
27
1.94
54255--54439
40
4.7
40
84
7
227
23
22
28
25
1.99
54255--54437
79
2.3
81
85
7
241
24
22
27
25
2.00
54256--54472
79
2.7
78
79
12
237
25
21
27
25
1.99
62327--62506
79
2.3
81
84
7
235
24
21
28
25
1.99
62327--62508
40
4.6
40
83
9
221
24
21
28
25
1.99
62358--62540
79
2.3
78
80
11
212
26
20
26
25
1.99
73964--74129
46
3.6
45
80
10
169
24
28
18
28
1.98
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
81592--81756
47
3.5
46
73
13
140
21
29
19
29
1.98
81578--81757
94
1.9
93
85
7
249
21
28
19
30
1.98
86567--86640
29
2.6
29
86
4
96
25
31
16
27
1.96
93578--93720
42
3.4
42
85
0
196
24
21
23
30
1.99
93584--93741
42
3.8
42
82
1
111
23
22
25
27
2.00
93584--93741
84
1.9
84
85
0
217
23
22
25
27
2.00
97823--97999
40
4.5
40
87
4
227
25
28
23
22
1.99
97823--97999
79
2.2
80
84
6
227
25
28
23
22
1.99

Tables:   1

The End!