Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold3612
Parameters: 2 7 7 80 10 50 1000
Length:  89565

Tables:   1   

This is table  1  of  1  ( 28 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
3526--3667
38
3.7
39
84
10
193
25
28
22
23
2.00
10543--10682
37
3.7
39
84
11
200
24
28
22
24
1.99
18559--18786
40
5.7
40
87
3
325
26
25
20
26
1.99
26125--26172
13
4.0
12
80
15
55
66
8
2
22
1.29
26362--26459
13
7.5
13
73
15
85
72
2
4
21
1.12
26362--26455
17
5.4
18
77
20
85
72
2
4
21
1.12
26331--26462
8
15.6
8
68
18
56
68
2
6
22
1.22
26407--26465
21
2.7
21
76
21
59
74
0
5
20
1.00
31744--31947
45
4.6
45
78
11
170
43
14
17
25
1.86
31782--31950
90
1.9
90
87
4
252
44
14
15
24
1.85
42966--43119
64
2.3
66
93
4
258
23
31
14
31
1.94
42924--43145
64
3.3
65
83
11
229
21
28
15
34
1.94
44686--44800
60
1.9
60
81
0
140
38
13
32
15
1.87
46279--46332
27
2.0
27
85
0
72
38
7
14
38
1.75
49653--49707
27
2.1
25
83
6
65
58
7
10
23
1.57
53647--53687
15
2.7
15
78
14
57
60
9
14
14
1.57
56142--56267
46
2.7
46
96
0
225
30
26
21
21
1.98
58479--58516
17
2.4
17
82
8
53
18
23
7
50
1.73
60568--60668
22
4.6
22
89
0
139
17
29
33
18
1.95
63622--63720
22
4.4
22
81
9
103
33
18
23
25
1.97
63622--63720
45
2.2
45
84
10
123
33
18
23
25
1.97
74964--74996
16
2.1
16
94
0
57
60
6
27
6
1.44
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
78203--78349
40
3.7
40
83
5
120
26
27
21
25
1.99
78246--78376
40
3.3
40
90
2
192
27
27
20
24
1.99
78249--78429
80
2.3
80
81
9
192
26
27
21
24
1.99
82025--82196
50
3.4
51
91
4
258
93
2
1
2
0.47
82025--82151
1
127.0
1
96
0
236
98
0
0
0
0.13
87438--87515
41
2.0
40
85
12
108
28
28
21
21
1.99

Tables:   1

The End!