Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold2496
Parameters: 2 7 7 80 10 50 1000
Length:  51830

Tables:   1   

This is table  1  of  1  ( 17 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
802--1012
40
5.4
40
90
4
322
33
29
19
17
1.95
824--1012
39
4.8
40
91
4
305
35
29
18
16
1.93
802--1012
79
2.7
78
91
1
325
33
29
19
17
1.95
7373--7532
79
2.0
79
92
0
266
21
11
11
55
1.67
12801--12838
19
2.0
20
85
15
53
39
23
0
36
1.55
13068--13238
93
1.8
93
89
0
270
30
28
19
21
1.97
13063--13235
46
3.7
46
74
13
174
31
27
19
21
1.97
13115--13254
46
3.0
44
74
14
115
30
28
18
22
1.98
14977--15128
48
3.2
47
84
1
187
34
28
18
19
1.95
27089--27132
23
1.9
23
95
0
79
20
20
9
50
1.75
38502--38570
23
2.9
23
85
10
86
31
24
18
24
1.98
41382--41493
40
2.8
40
94
0
188
23
29
22
25
1.99
41464--41574
56
2.0
54
85
13
147
27
26
19
26
1.99
41540--41622
44
1.9
43
97
2
157
32
24
18
25
1.97
49605--49690
39
2.2
40
87
2
129
25
29
19
25
1.99
49585--49802
110
2.0
110
79
5
235
30
27
17
24
1.97
49694--49819
39
3.2
39
94
4
227
30
26
18
23
1.97

Tables:   1

The End!