Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold1005
Parameters: 2 7 7 80 10 50 1000
Length:  80285

Tables:   1   

This is table  1  of  1  ( 14 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
8932--8974
13
3.3
13
75
12
52
58
9
9
23
1.58
18543--18571
14
2.0
15
93
6
51
31
0
0
68
0.89
33368--33427
28
2.1
28
96
0
111
46
16
5
31
1.69
39679--39723
23
2.0
23
86
8
65
22
8
13
55
1.65
39690--39748
23
2.6
23
83
5
66
16
13
13
55
1.68
41903--41961
28
2.1
27
84
3
73
15
20
25
38
1.91
51976--52011
17
2.1
17
100
0
72
52
11
5
30
1.59
52619--52656
20
1.9
20
88
0
58
34
5
7
52
1.53
56812--56860
16
3.1
16
87
0
80
40
4
34
20
1.71
60592--60632
19
2.1
20
86
4
57
46
4
0
48
1.23
60592--60645
19
2.7
20
82
8
56
48
7
0
44
1.31
73725--73773
25
2.0
25
91
0
80
12
22
32
32
1.91
73824--73874
26
2.0
26
96
0
93
11
23
35
29
1.90
73645--73951
101
3.0
103
92
4
516
18
19
29
32
1.96

Tables:   1

The End!