Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold588
Parameters: 2 7 7 80 10 50 1000
Length:  72490

Tables:   1   

This is table  1  of  1  ( 27 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
10348--10402
15
3.8
14
80
7
65
74
1
21
1
1.01
17228--17266
17
2.4
16
87
12
53
5
15
7
71
1.26
17259--17327
12
5.5
12
77
14
59
14
5
4
75
1.15
21813--21849
6
6.2
6
93
0
56
37
27
0
35
1.57
21837--21897
25
2.6
24
77
15
65
13
24
0
62
1.31
21854--21898
20
2.2
20
84
4
54
8
26
0
64
1.23
22706--22775
30
2.3
31
85
7
99
10
12
2
74
1.18
22814--22863
13
3.8
13
81
7
66
24
8
2
66
1.29
22819--22863
12
3.6
12
82
11
54
20
4
2
73
1.11
23016--23112
30
3.2
30
75
2
106
28
15
26
28
1.96
28210--28234
13
1.9
13
100
0
50
20
8
0
72
1.10
28558--28620
21
3.0
21
83
2
81
31
3
33
31
1.74
33255--33307
23
2.4
22
76
20
56
9
18
1
69
1.25
37604--37637
11
3.0
11
91
4
50
14
11
2
70
1.27
43777--43814
20
1.9
20
94
0
67
84
5
0
10
0.77
44694--44744
21
2.4
20
81
12
57
76
3
17
1
1.03
44695--44736
15
2.9
15
79
10
52
76
4
19
0
0.96
44833--44876
12
3.7
12
87
0
61
61
0
27
11
1.30
44833--44881
24
2.0
24
88
0
71
57
0
26
16
1.40
49142--49194
23
2.4
22
76
20
56
9
18
1
69
1.25
52333--52357
13
1.9
13
100
0
50
16
32
16
36
1.90
52931--53018
30
2.9
30
77
0
104
28
27
15
28
1.96
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
54002--54055
20
2.7
20
82
0
63
24
20
18
37
1.94
54002--54075
30
2.5
30
86
8
98
21
20
18
39
1.93
54002--54066
20
3.2
20
71
16
53
23
21
16
38
1.93
59974--60029
1
56.0
1
96
0
103
98
0
0
1
0.13
60340--60400
12
5.2
11
73
19
52
3
19
1
75
1.03

Tables:   1

The End!