Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold3145
Parameters: 2 7 7 80 10 50 1000
Length:  65746

Tables:   1   

This is table  1  of  1  ( 35 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
3845--3881
5
7.6
5
82
17
51
81
0
0
18
0.70
3844--3874
9
3.4
9
100
0
62
77
0
0
22
0.77
12346--12377
12
2.6
13
90
9
50
75
0
0
25
0.81
14428--14492
20
3.3
19
73
16
51
38
16
21
23
1.93
16266--16328
33
1.9
33
84
12
85
12
26
6
53
1.62
16325--16422
27
3.6
27
70
20
78
9
18
3
69
1.29
16345--16391
16
3.3
15
82
14
55
8
19
0
72
1.10
16345--16391
14
3.3
14
85
14
53
8
19
0
72
1.10
16389--16446
18
3.3
17
81
9
71
5
17
6
70
1.28
16343--16449
6
17.7
6
67
11
58
6
18
3
71
1.24
17459--17507
15
3.2
15
72
16
55
10
16
4
69
1.32
18911--18972
30
2.1
30
81
6
72
56
9
3
30
1.47
19098--19162
20
3.3
19
73
16
51
38
16
21
23
1.93
19881--19977
30
3.2
30
76
2
106
27
27
15
28
1.96
22321--22368
20
2.4
20
75
0
60
20
29
18
31
1.97
27188--27284
30
3.2
30
73
2
88
28
13
27
29
1.94
28114--28179
21
3.0
22
86
4
80
30
4
30
34
1.78
31077--31107
12
2.6
12
100
0
62
25
16
12
45
1.83
31155--31211
5
11.0
5
75
20
55
3
17
1
77
1.00
31155--31211
16
3.7
14
82
15
60
3
17
1
77
1.00
31155--31222
21
3.2
21
76
15
61
2
17
2
76
1.04
33743--33839
30
3.2
30
73
2
88
28
13
27
29
1.94
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
35391--35441
15
3.5
15
76
12
52
7
15
15
60
1.56
35383--35440
30
2.0
29
86
10
82
10
15
15
58
1.62
38717--38765
21
2.3
21
82
0
62
75
4
4
16
1.11
39599--39654
25
2.2
25
100
0
112
30
21
10
37
1.87
39599--39664
25
2.8
23
91
8
82
30
21
10
37
1.87
40451--40495
17
2.9
15
81
15
56
6
24
2
66
1.27
43064--43151
30
2.9
30
75
0
95
28
15
28
27
1.96
43248--43305
10
5.8
10
76
8
55
22
20
27
29
1.99
59272--59298
10
2.7
10
100
0
54
29
33
18
18
1.95
59427--59514
30
2.9
30
75
0
95
27
28
15
28
1.96
62076--62120
17
2.9
15
81
15
56
66
2
24
6
1.27
62913--62965
25
2.1
25
100
0
106
37
11
20
30
1.88
63800--63846
20
2.3
20
81
0
58
17
4
4
74
1.14

Tables:   1

The End!