Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold3276
Parameters: 2 7 7 80 10 50 1000
Length:  62882

Tables:   1   

This is table  1  of  1  ( 32 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
9809--9980
93
1.8
93
96
0
317
27
29
21
20
1.98
9802--9977
46
3.8
46
79
12
216
28
29
21
20
1.98
11306--11373
34
2.0
34
85
0
91
20
22
20
36
1.95
13476--13531
25
2.2
25
87
0
76
55
5
7
32
1.50
17009--17051
18
2.4
19
81
18
56
74
4
9
11
1.20
17137--17206
23
3.2
23
76
17
78
68
0
30
1
0.98
17291--17381
39
2.4
36
89
8
137
32
5
12
49
1.63
17288--17387
40
2.5
39
87
6
148
31
5
13
51
1.62
23668--23694
7
3.9
7
100
0
54
59
14
11
14
1.62
28720--28820
52
1.9
52
97
0
193
21
25
16
35
1.95
30747--30778
16
2.0
16
93
0
55
65
6
3
25
1.31
32069--32099
15
2.1
15
93
0
53
70
3
19
6
1.22
32126--32184
6
10.2
6
70
7
50
74
0
20
5
1.00
32105--32182
30
2.6
30
78
10
88
71
1
21
5
1.12
32143--32184
18
2.3
19
92
8
70
73
0
23
2
0.94
33273--33316
21
2.1
21
86
0
61
25
9
15
50
1.74
34364--34401
20
1.9
20
88
0
58
13
23
23
39
1.90
34373--34420
21
2.3
20
85
3
60
14
16
22
45
1.84
37339--37371
8
4.1
8
96
0
57
45
39
3
12
1.57
38592--38634
16
2.7
16
77
0
50
53
18
16
11
1.72
38613--38658
24
1.9
24
90
0
74
52
19
17
10
1.74
38869--38957
29
3.1
29
87
4
119
28
17
28
25
1.98
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
38874--38968
29
3.3
28
81
12
104
28
17
27
26
1.98
40745--40779
15
2.2
16
90
5
54
22
17
0
60
1.37
42062--42111
26
1.9
26
84
8
66
44
10
0
46
1.37
55139--55188
18
2.7
19
75
9
59
40
16
22
22
1.91
55511--55707
27
7.3
27
77
5
166
41
18
12
27
1.86
55548--55707
81
2.0
81
86
1
223
44
18
11
25
1.84
55509--55707
54
3.7
54
77
6
190
41
18
12
27
1.86
55592--55738
27
5.5
25
75
17
66
40
19
12
27
1.88
55699--55787
27
3.3
27
85
0
106
19
16
23
40
1.91
57663--57879
39
5.6
40
88
5
295
27
23
27
22
1.99

Tables:   1

The End!