Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold2569
Parameters: 2 7 7 80 10 50 1000
Length:  60491

Tables:   1   

This is table  1  of  1  ( 25 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2396--2572
27
6.6
27
82
4
187
28
27
15
27
1.96
2417--2571
82
1.9
80
85
5
213
28
27
16
27
1.97
10483--10658
27
6.6
27
83
5
178
28
28
15
26
1.96
10504--10657
81
1.9
80
88
4
229
28
28
16
26
1.97
13512--13729
46
4.7
46
77
9
228
27
27
21
23
1.99
13563--13731
93
1.8
93
89
0
266
28
27
20
23
1.99
21115--21288
46
3.8
45
75
16
176
28
28
21
21
1.99
21122--21292
93
1.8
93
91
0
279
28
28
21
21
1.99
27896--27949
15
3.5
15
87
9
81
35
40
16
7
1.77
27896--27949
17
3.3
17
92
5
85
35
40
16
7
1.77
32975--33186
46
4.5
48
75
8
186
24
26
18
29
1.98
32975--33189
94
2.3
94
86
1
279
24
26
19
29
1.98
38698--38780
27
3.1
27
83
0
103
33
14
20
31
1.93
38762--38832
27
2.7
27
84
6
83
40
22
8
28
1.83
38787--38884
27
3.6
27
79
6
101
41
21
9
27
1.83
38908--39024
27
4.4
25
83
10
85
46
18
5
29
1.71
38925--39038
27
4.3
27
87
6
144
47
18
5
28
1.70
38925--39036
52
2.1
55
83
8
142
48
16
5
29
1.69
39031--39084
27
2.0
27
88
0
81
29
18
18
33
1.95
39040--39096
27
2.1
27
86
0
78
28
21
17
33
1.96
40871--40902
15
2.1
16
94
5
57
25
0
6
68
1.12
43234--43308
6
11.8
6
73
9
51
70
0
22
6
1.10
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
51441--51664
40
5.7
39
82
4
236
25
28
21
23
1.99
51441--51621
79
2.3
79
87
1
247
25
28
21
23
1.99
58542--58785
39
6.2
40
85
4
266
25
28
22
23
1.99

Tables:   1

The End!