Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold1845
Parameters: 2 7 7 80 10 50 1000
Length:  57321

Tables:   1   

This is table  1  of  1  ( 18 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
7774--7958
40
4.6
39
83
5
203
24
21
28
25
1.99
7774--7956
79
2.3
81
82
7
214
24
21
27
25
1.99
7813--7991
79
2.3
78
79
9
184
27
20
26
25
1.99
9341--9611
136
2.0
136
96
1
499
25
26
22
25
2.00
16109--16260
40
3.8
40
89
1
207
24
21
28
26
1.99
16109--16280
80
2.2
80
82
3
204
23
20
27
27
1.99
21847--21880
17
2.0
17
94
0
59
35
20
5
38
1.77
22698--22753
16
3.5
16
70
0
58
51
26
5
16
1.65
22702--22767
32
2.1
32
97
0
123
53
24
6
16
1.66
22712--22764
16
3.3
16
70
0
52
52
22
5
18
1.66
23537--23624
45
2.0
45
86
0
122
40
22
10
26
1.86
35823--35948
46
2.7
46
92
0
207
21
21
26
30
1.98
39271--39372
33
3.1
33
84
1
105
22
22
26
28
1.99
41888--42070
79
2.3
81
83
7
223
24
22
27
24
2.00
41889--42072
40
4.6
40
82
9
207
24
22
28
24
2.00
41941--42105
79
2.1
79
83
6
201
26
21
27
24
1.99
50035--50214
39
4.6
40
78
13
171
25
20
28
25
1.99
55294--55403
58
1.9
56
83
12
143
35
26
12
25
1.92

Tables:   1

The End!