Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold888
Parameters: 2 7 7 80 10 50 1000
Length:  55022

Tables:   1   

This is table  1  of  1  ( 21 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
621--654
14
2.5
13
86
9
50
82
5
0
11
0.83
6647--6712
33
2.0
34
82
14
84
74
3
19
3
1.09
8909--9004
30
3.2
30
75
4
106
28
27
15
29
1.96
10747--10778
11
2.6
13
85
14
50
78
6
12
3
1.06
11679--11749
37
1.9
37
86
11
101
76
2
18
2
1.04
11689--11738
6
8.2
6
83
14
50
76
2
20
2
0.99
13954--14050
30
3.2
30
75
2
106
28
26
15
28
1.96
19610--19822
108
2.0
108
100
0
426
35
7
19
37
1.80
19945--20002
28
2.1
28
100
0
116
32
6
17
43
1.75
25961--26057
30
3.2
31
73
5
101
27
28
15
27
1.96
34644--34700
28
2.0
28
96
0
105
35
19
10
35
1.86
40375--40471
30
3.2
30
71
8
90
27
15
28
27
1.96
42582--42664
30
2.7
30
81
9
89
12
21
1
65
1.33
42667--42696
11
2.6
12
89
10
53
26
13
13
46
1.80
42744--42802
5
11.2
5
73
22
50
3
18
1
76
1.02
42745--42808
12
5.3
12
74
18
62
3
20
1
75
1.03
42745--42797
21
2.5
22
84
9
65
3
18
1
75
1.05
43712--43750
11
3.5
11
83
13
53
10
7
5
76
1.13
45408--45504
30
3.2
30
74
8
99
28
15
27
27
1.96
46181--46206
13
2.0
13
100
0
52
23
23
0
53
1.46
51633--51699
29
2.4
27
78
11
73
14
25
1
58
1.46

Tables:   1

The End!