Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold905
Parameters: 2 7 7 80 10 50 1000
Length:  51684

Tables:   1   

This is table  1  of  1  ( 20 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
4286--4672
47
8.4
47
88
5
549
28
31
8
32
1.86
4286--4672
93
4.2
93
88
5
536
28
31
8
32
1.86
4286--4672
140
2.8
140
87
5
565
28
31
8
32
1.86
8033--8177
40
3.6
40
82
6
168
26
24
25
24
2.00
15478--15772
47
6.3
47
90
2
459
28
29
8
33
1.86
15623--15699
25
3.2
25
68
17
81
32
29
3
33
1.76
29752--29897
37
3.9
37
95
0
247
26
31
18
23
1.97
30044--30444
48
8.1
48
88
6
570
32
25
5
36
1.80
30047--30437
100
3.9
100
90
5
605
32
25
5
36
1.80
30044--30437
152
2.6
147
89
6
621
32
25
5
36
1.80
35717--35863
29
5.2
28
80
4
145
27
32
13
26
1.94
35717--35859
57
2.5
58
82
6
159
26
33
13
25
1.94
37441--37465
13
1.9
13
100
0
50
88
4
8
0
0.64
38596--38669
38
1.9
39
94
2
132
27
22
27
22
2.00
38609--38733
62
2.0
61
86
4
171
26
21
27
24
1.99
38670--38746
39
2.0
39
89
5
120
24
22
27
25
2.00
45221--45364
29
5.2
28
78
9
136
27
33
13
26
1.93
45221--45360
56
2.5
58
81
7
157
26
34
13
25
1.93
48063--48225
38
4.3
39
79
13
173
25
22
26
25
2.00
48062--48225
75
2.2
76
82
13
198
25
22
26
25
2.00

Tables:   1

The End!