Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold2906
Parameters: 2 7 7 80 10 50 1000
Length:  53622

Tables:   1   

This is table  1  of  1  ( 15 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
4689--4912
40
5.7
39
82
4
236
25
28
21
23
1.99
4689--4869
79
2.3
79
87
1
247
25
28
21
23
1.99
11773--11997
40
5.7
39
88
3
290
24
28
23
23
2.00
14899--14994
40
2.4
41
83
11
119
31
15
26
27
1.96
16224--16286
27
2.4
26
76
10
65
25
7
14
52
1.68
18204--18300
30
3.2
31
71
8
85
28
15
27
27
1.96
22402--22523
46
2.6
47
82
10
140
26
23
13
36
1.93
28751--28801
26
2.0
26
92
0
84
29
35
25
9
1.88
28614--28880
104
2.6
104
92
2
430
29
30
20
18
1.97
29208--29271
30
2.2
29
81
10
76
29
28
6
35
1.82
29215--29271
30
1.9
30
85
3
80
29
24
7
38
1.82
33251--33324
29
2.6
29
86
4
96
27
16
31
25
1.96
38135--38315
47
3.9
47
74
11
147
29
18
29
22
1.97
44350--44549
46
4.3
46
76
13
162
28
18
28
25
1.98
51461--51494
17
1.9
17
88
5
50
14
44
29
11
1.81

Tables:   1

The End!