Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold1030
Parameters: 2 7 7 80 10 50 1000
Length:  52400

Tables:   1   

This is table  1  of  1  ( 27 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1410--1719
39
8.0
39
93
1
534
21
26
29
23
1.99
1410--1727
77
4.1
78
95
2
561
22
25
28
23
1.99
1410--1727
116
2.7
116
92
1
532
22
25
28
23
1.99
7315--7626
39
8.1
39
93
2
540
20
25
30
23
1.98
7315--7634
77
4.1
77
95
2
554
21
25
29
23
1.99
13235--13549
39
8.1
39
92
0
522
21
25
29
23
1.99
19533--19803
40
6.8
40
88
2
359
26
26
21
24
1.99
25506--25736
40
5.8
40
86
2
295
23
24
29
23
1.99
30597--30894
40
7.5
40
92
1
426
26
27
22
23
2.00
37871--38223
49
7.4
49
91
4
587
33
8
28
29
1.87
37871--38228
47
7.5
47
92
3
590
33
8
28
29
1.86
37871--38228
96
3.8
96
95
2
634
33
8
28
29
1.86
38197--38255
25
2.4
25
100
0
118
35
0
28
35
1.58
38101--38349
121
2.1
120
95
3
446
32
6
28
31
1.83
38150--38295
72
2.0
72
97
0
274
33
5
28
32
1.80
38222--38493
47
5.7
47
91
3
420
32
8
30
29
1.86
38052--38398
168
2.1
169
97
1
660
33
7
28
30
1.84
38222--38493
143
1.9
141
91
3
447
32
8
30
29
1.86
41277--41378
29
3.6
29
78
6
109
30
28
13
27
1.94
41588--41639
24
2.2
24
89
0
77
11
21
15
51
1.74
41589--41619
16
1.9
16
93
0
53
12
25
16
45
1.83
42853--42886
16
2.1
16
100
0
68
55
11
5
26
1.58
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
43930--44008
28
2.8
28
82
0
95
29
25
12
32
1.93
48901--49197
57
5.3
57
87
2
397
29
34
17
18
1.94
48932--49195
28
9.5
28
68
9
146
29
34
18
17
1.94
49075--49167
26
3.5
26
69
22
84
30
38
16
15
1.89
51169--51239
27
2.6
27
86
2
79
29
28
12
29
1.93

Tables:   1

The End!